Evolutionary genomics resources
for S. cerevisiae and S. paradoxus
Gene Region Polymorphism Statistics
S. cerevisiae
| Region |
Genes |
D |
p-value |
Low D |
High D |
Taxa |
θ |
π |
Length |
| 5' Full |
6533 |
-1.9138 |
0.0582 |
3435 |
18 |
24.5582 |
0.052 |
0.0224 |
705.056 |
| 5' Outer |
3687 |
-1.8032 |
0.0675 |
1908 |
42 |
24.5582 |
0.0629 |
0.03 |
525.319 |
| 5' Inner |
6503 |
-2.31 |
0.0337 |
5050 |
13 |
24.5582 |
0.0483 |
0.0194 |
377.231 |
| 5' UTR |
2466 |
-1.5091 |
0.1341 |
54 |
2 |
24.5582 |
0.0367 |
0.0166 |
102.937 |
| CDS |
6575 |
-2.1378 |
0.0449 |
4680 |
7 |
24.5582 |
0.0269 |
0.011 |
1274.89 |
| Intron |
271 |
-1.8859 |
0.0946 |
103 |
0 |
30.2694 |
0.0392 |
0.0155 |
241.945 |
| 3' UTR |
2453 |
-1.5068 |
0.1291 |
83 |
8 |
24.5582 |
0.0419 |
0.0197 |
111.584 |
| 3' Inner |
6365 |
-2.3009 |
0.0403 |
4606 |
36 |
24.5582 |
0.049 |
0.0185 |
312.411 |
| 3' Outer |
2561 |
-1.8842 |
0.0595 |
1472 |
50 |
24.5582 |
0.0667 |
0.0329 |
514.416 |
| 3' Full |
6534 |
-1.8949 |
0.0748 |
2520 |
27 |
24.5582 |
0.0514 |
0.023 |
543.205 |
| Average |
3860.125 |
-1.9172 |
0.0755 |
2244.5 |
19.75 |
25.2721 |
0.0465 |
0.0204 |
432.5916 |
S. paradoxus
| Region |
Genes |
D |
p-value |
Low D |
High D |
Taxa |
θ |
π |
Length |
| 5' Full |
4869 |
-1.3008 |
0.1881 |
16 |
3 |
17.9582 |
0.0452 |
0.0284 |
654.642 |
| 5' Outer |
2516 |
-1.1395 |
0.1765 |
118 |
40 |
17.9582 |
0.0505 |
0.0333 |
485.648 |
| 5' Inner |
4844 |
-1.5522 |
0.1494 |
536 |
1 |
17.9582 |
0.0427 |
0.0262 |
362.439 |
| 5' UTR |
2163 |
-1.0167 |
0.2248 |
16 |
2 |
17.9582 |
0.0427 |
0.0282 |
102.291 |
| CDS |
5250 |
-1.4834 |
0.1612 |
36 |
0 |
17.9582 |
0.0228 |
0.0143 |
1408.01 |
| Intron |
151 |
-1.0366 |
0.2855 |
2 |
0 |
18.1939 |
0.0532 |
0.038 |
273.748 |
| 3' UTR |
2146 |
-0.9987 |
0.2196 |
20 |
6 |
17.9582 |
0.0445 |
0.0291 |
111.417 |
| 3' Inner |
4713 |
-1.5307 |
0.1466 |
721 |
20 |
17.9582 |
0.0445 |
0.0257 |
290.129 |
| 3' Outer |
1613 |
-1.1924 |
0.1635 |
49 |
30 |
17.9582 |
0.0507 |
0.0342 |
484.29 |
| 3' Full |
4877 |
-1.1485 |
0.1958 |
21 |
12 |
17.9582 |
0.0455 |
0.029 |
488.182 |
| Average |
2924.5 |
-1.2438 |
0.1909 |
187.25 |
12.375 |
17.9877 |
0.044 |
0.0286 |
439.7465 |
Interspecies Divergence
| Region |
Genes |
Taxa |
θ |
S |
Identities |
Gaps |
Length |
| 5' Full |
5261 |
17.9582 |
0.2681 |
124.49 |
445.474 |
11.8055 |
569.964 |
| 5' Outer |
2316 |
17.9582 |
0.2294 |
49.8032 |
150.01 |
4.3178 |
199.814 |
| 5' Inner |
4834 |
17.9582 |
0.2049 |
67.2002 |
255.625 |
6.08 |
322.825 |
| 5' UTR |
2314 |
17.9582 |
0.2827 |
8.8446 |
33.0399 |
1.0264 |
41.8845 |
| CDS |
5203 |
17.9582 |
0.1099 |
146.057 |
1182.18 |
3.2614 |
1328.24 |
| Intron |
164 |
18.1939 |
0.2145 |
58.2667 |
203.249 |
5.5697 |
261.515 |
| 3' UTR |
2299 |
17.9582 |
0.274 |
9.2975 |
36.1805 |
1.2046 |
45.478 |
| 3' Inner |
4702 |
17.9582 |
0.2148 |
55.0389 |
193.496 |
5.0435 |
248.535 |
| 3' Outer |
1373 |
17.9582 |
0.2347 |
28.4776 |
83.4614 |
2.277 |
111.939 |
| 3' Full |
5253 |
17.9582 |
0.2651 |
91.1438 |
319.656 |
8.9713 |
410.8 |
| Average |
2900.625 |
17.9877 |
0.2206 |
52.8732 |
267.1552 |
3.5976 |
320.0288 |