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java.lang.Objectedu.upenn.gloDB.io.FASTAParserDefault
public class FASTAParserDefault
The default parser for FASTA headers. It returns a HashMap that contains one entry: the key is "FASTA" and the value is the header line with the leading '>' removed. Thus no assumptions are made about the structure of the header, other than it beginning with a '>'.
Constructor Summary | |
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FASTAParserDefault()
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Method Summary | |
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java.util.HashMap |
parseHeader(java.lang.String header)
As the default parser, do not process the header at all, except to remove the leading '>'. |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public FASTAParserDefault()
Method Detail |
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public java.util.HashMap parseHeader(java.lang.String header)
parseHeader
in interface FASTAParser
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