Package edu.upenn.gloDB.io

Interface Summary
DataFile Interface for files that contain Features or Sequences (ie.
FASTAParser Interface for parsing of FASTA headers.
SequenceFile Interface for files that contain Sequences (ie.
TrackFile Interface for files that contain Features or Sequences (ie.
 

Class Summary
FASTAParserDefault The default parser for FASTA headers.
FASTAParserFly Parses the header line at the beginning of each sequence.
FASTAParserMinimal Parses the header line at the beginning of each FASTA sequence.
FASTASequence Import Sequence data from a FASTA file.
FASTATrack Import Track data from a FASTA file.
FileIO Import and export utilities.
GenBankTrack Import/Export Track data from/to GenBank files.
GenomeBrowser Import/Export Track data from/to Genome Browser.
GFFTrack Import/Export Track data from/to GFF files.
GloDBTrack Import/Export Track data from/to GloDB files.
HTMLFile Save URL, HTML text, or InputStream as HTML file.
HTMLFile.HTMLFilter HTML FileFilter.
 




Copyright 2012 Stephen Fisher and Junhyong Kim, University of Pennsylvania. All Rights Reserved.